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Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 44)

Search by Pfam ID:

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# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)		 Full name and representative sequence
4301 PF04136
(Sec34)
 click to view
Estimated TM-score=0.53;
hard target.		 >Sec34-like family (Length=146)
DVLSVCQEQCDSILSDVNAALERLDSLQKQYLFVSTKTGTLHEACEQLLKEQSELVDLAESIQQKLSYFNELENINTKLN
SPTLSVNSEGFIPMLSKLDECIEYVSSHPHFKDYPVYLTKFRQCLSRAMLLIKSHTVSSLQNLTAQ
4302 PF04001
(Vhr1)
 click to view
Estimated TM-score=0.53;
hard target.		 >Transcription factor Vhr1 (Length=88)
SGTTHRIREQLNFSDDKKWKQFSSRRLELIDKFNLSERKASEQDENIRQIANILRTEFGYPTTTSSEFEKLVTAAVQSVR
RNRKRSTK
4303 PF03929
(PepSY_TM)
 click to view
Estimated TM-score=0.53;
hard target.		 >PepSY-associated TM region (Length=301)
NIHLWLSLPLGILISIICLSGAALVFEQDITQALQRSIYRVTPPQKGAEALSPEALIECIQKQASDSLHLTALQLSHNPE
ETAFASFRETGKKRLSINPYTGKALGWTETYPFFQTMRKLHRWLMDPPPSKGEKSVGKVVVGITTLLMVFILISGLVIWI
PRTRKALKNRLCVSCTKGWRRFWYDTHVSIGFYSTIFLLVMALTGLTWSFGWYRTAAYSLFGENPSASVHRVDKGKEKPR
KDEVRITWKDAQPSAPQSMKGWFYAFHTGSWGGMFTKIVYFLAALSGGVLPLSGYYLWWKR
4304 PF03824
(NicO)
 click to view
Estimated TM-score=0.53;
easy target.		 >High-affinity nickel-transport protein (Length=300)
LWLLVGLSFAYGIFHAAGPGHGKAVISSYMVANEVALKRGILLSFVSALLQGLTAVAVMLLAYFVLRGTAISMTDAAWFM
EIMSFVFVTLFGAWLLWRKLGPSILRLFGAGPAYSLSAAHAGHSHAGHSHAAHSAHAHSHAHGDHDHAHDHHAHDHDHGV
HDHDHGAHAHHDHAAGEVCETCGHSHAPDPALLSGDRFDWRTAWSAVAAVGIRPCSGALIVLSFALLNGLWLGGLLSVLA
MSLGTAITVSALATIAVTAKNWAVYFAGDGRMGNRIHSIVEIGGAAFVFLFGLLLLSASL
4305 PF03766
(Remorin_N)
 click to view
Estimated TM-score=0.53;
hard target.		 >Remorin, N-terminal region (Length=52)
KDVAEEKASVPPPAEEKPDDSKALAIVEKVEDPPAEKSSGGSTERDAVLARL
4306 PF03672
(UPF0154)
 click to view
Estimated TM-score=0.53;
hard target.		 >Uncharacterised protein family (UPF0154) (Length=60)
IVVALLGGAVAGFFIARNYFKKYLEKNPPINEQMIRAMMSQMGRKPSEKQVRQVMASMKQ
4307 PF03608
(EII-GUT)
 click to view
Estimated TM-score=0.53;
hard target.		 >PTS system enzyme II sorbitol-specific factor (Length=167)
LAKLAEGFIGLFEEGGKTFVGLVTGILPTLIVLITFVNAIIKIIGEDKVQRVAQKATKNAITRYTILPLISVFFLTNPMC
YTFGKFLDEKYKPAYYDAAVSFVHPITGLFPHANPAELFVYLGVAEGIKKLGLPLGQLAVRYFIVGLVIIFIRGLVTEFM
TIRMMKK
4308 PF03369
(Herpes_UL3)
 click to view
Estimated TM-score=0.53;
hard target.		 >Herpesvirus UL3 protein (Length=135)
TFDTLFMVSSIDELGRRQLTDTIRKDLRLSLAKFSIACTKTSSFSGTAARQRKRGAPPQRTCVPRSNKSLQMFVLCKRAN
AAQVREQLRAVIRSRKPRKYYTRSSDGRLCPAVPVFVHEFVSSEPMRLHRDNVML
4309 PF03312
(DUF272)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Protein of unknown function (DUF272) (Length=125)
YLWNLDSKTEGLFVSKNHSLAQGHHFEGIFKKNPDGRWTCQKYENPIEGLLTGGINPNNKIYFTVKIDKYQPAKGNTKYG
HATAKYIGDVLEGDSENTKLSAECNGKMVNIQRRGIGDKDFVWMS
4310 PF03248
(Rer1)
 click to view
Estimated TM-score=0.53;
hard target.		 >Rer1 family (Length=165)
TQQRWQHYLDEVTPYTTNRWIATGVLVVIYAIRVLVAQGWYIVTYALGIYLLNLFLAFLQPKFDPSLEMDIQESEVEEGP
ALPTKNDEEFRPFIRRLPEFKFWYSATRAIVIAFFCTLFSIFDVPVFWPILLVYFCILFYITMKRQIKHMIKYRYVPFNV
GKKSY
4311 PF03086
(DUF240)
 click to view
Estimated TM-score=0.53;
hard target.		 >Domain of unknown function (DUF240) (Length=121)
MKFHTVYVGKNTKIDLDFALQAQTNNFSSLEELRESFTNSGQTLSTQLFWKPVIDKLITDEGNDLTTIARTAIGENLFDL
KVNLTDSVIDGTVLTKARKSFEERILNPFIEQRKEAKRIHD
4312 PF03050
(DDE_Tnp_IS66)
 click to view
Estimated TM-score=0.53;
hard target.		 >Transposase IS66 family (Length=288)
GRAGPKLLAGILCDKFLQHLPLNRQSAAFAREGIDLDTSTLADWVGACTATLAPLTALIRAHVLAARRLHADDTTVPVLA
RGRTVTGRLWNYVRDDAPFGGLAPPAVWFRYSRDRKGEHPADHLTGWTGILQSDAYGGYTHLAKPGRQPAPVVPAGCWAH
GRRGLFKIAEKDKAPLAIEAVRRIDAIFDAERAINGSSAAHRLEIRKESIAPLVEELLDWMRDTCRRMSSKNPIAQAMNY
ILRRGDTFTVFLEDGRICLTNNAAERAIRGIALGRKAWLFAGSDRGGE
4313 PF02711
(Pap_E4)
 click to view
Estimated TM-score=0.53;
very hard target.		 >E4 protein (Length=89)
LCAVPVTDRYPLLNLLPNYQTPPRPIPPQQPHAPKKQSRRRLESDLDSVQSQSPLSPTECPWTILTTHSTVTVQATTPDG
TSVVVTLRL
4314 PF02554
(CstA)
 click to view
Estimated TM-score=0.53;
easy target.		 >Carbon starvation protein CstA (Length=377)
VNAIWLIVAAVCVYAIAYRFYSKFIAKKVFQLDDNRKTPAEIFNDGKDYVPTNKWVLFGHHFAAIAGAGPLVGPILAAQM
GYLPGTLWIIVGVVLAGAVQDFIILFASMRRNGKSLGEMIKEEIGPVTGFIAMLGILGIMIILLAVLALVVVKALVGSPW
GMFTIAATIPIAIFMGVYMRYMRPGRVGEASFIGFVLLMLSIVAGQYVAENPTLANMFTFKGETIALLMIGYGFVASVLP
VWLLLAPRDYLSTFLKIGTIVGLALGILFVAPDLQMPAITKFVDGTGPVFAGNLFPFLFITIACGAVSGFHSLVSSGTTP
KMIERESHARPIGYGAMLMESFVAVMALIAACVLTPGTYFAINSPAAAIGQDVVQAA
4315 PF02349
(MSG)
 click to view
Estimated TM-score=0.53;
hard target.		 >Major surface glycoprotein (Length=75)
NLTDEKCRKYEEKCLLLEEADPSNLEEKCVKLRDRCYGRRRQGVTKEILFRALEGKVNDTDECKKRMKEICQGLS
4316 PF02124
(Marek_A)
 click to view
Estimated TM-score=0.53;
easy target.		 >Marek's disease glycoprotein A (Length=204)
RAEFVWFEDGRRVFDPAQIHTQTQENPDGFSTVSTVTSAAVGXQGPPRTFTCQLTWHRDSVSFSRRNASGTASVLPRPTI
TMEFTGDHAVCTAGCVPEGVTFAWFLGDDSSPAEKVAVASQTSCGRPGTATIRSTLPVSYEQTEYICRLAGYPDGIPVLE
HHGSHQPPPRDPTERQVIRAVEGAGIGVAVLVAVVLAGTAVVYL
4317 PF02010
(REJ)
 click to view
Estimated TM-score=0.53;
hard target.		 >REJ domain (Length=463)
ADMRVNCPGPKSTKVSWNIYKVSNLSDKPDWSKPFNPTGIEGRHFIRLKIPCSSLDTGLYLFNFTVQLISPTFPQMIERS
DAVLIEVGSDLWGAVIMGGHFRSVGFSDRWILKGSVLSNGEMVSLSQGLSYTWYCTKQERDYTSMALSTVGKCYPDQVDL
KWTTSSNSIQMVLPETLQANNTYHFLLLVQNGSRITQAQQTVHVRAHGALVLNIACTENCGTSVIPTERFSLSGKCGNCR
EIKSWYYWSLRSAQSHEIKFDWSSRTTTGRSSSYLHFKAFALVSMAEEFYILSLKVVTKNGQSSSCEYFFYINAPPQIGN
CVLHPKEGIAFLTKFIIQCHGFEDRNQPLAYKVIAASDQMTISSISSIQNNTLGIIIYVGHESKTPWSFLPPGRPSQTFA
LPIYVQVFDALGASSQVTLQATVLDQRQPPTNAVLHQQLYDLMNGSSALMTKLLITKDYLSIG
4318 PF01508
(Paramecium_SA)
 click to view
Estimated TM-score=0.53;
easy target.		 >Paramecium surface antigen domain (Length=59)
TLDSECQAISNRCITDGTHCVEIDACSTYKKQLPCVKNTAGSLCYWDTTNNTCVDANTC
4319 PF01107
(MP)
 click to view
Estimated TM-score=0.53;
hard target.		 >Viral movement protein (MP) (Length=199)
LKNISKTQLTLEKEKIFKMPNVLSQVMKKAFSRKNEILYCVSTKELSVDIHDATGKVYLPLITKEEINKRLSSLKPEVRK
TMSMVHLGAVKILLKAQFRNGIDTPIKIALIDDRINSRRDCLLGAAKGNLAYGKFMFTVYPKFGISLNTQRLNQTLSLIH
DFENKNLMNKGDKVMTITYVVGYALTNSHHSIDYQSNAT
4320 PF18850
(LPD30)
 click to view
Estimated TM-score=0.52;
hard target.		 >Large polyvalent protein associated domain 30 (Length=119)
DMEISIGTRINCVLHWAGPGTVYAIHGEQRPGSVRVTCGIAHSGGSASFDVVFDNGRMSAKVPECIIRGVQWSVLPGIAS
AEQIAEALAHAACVKAEKANAAEQAAQRFAAEVERLRIV
4321 PF18169
(SLATT_6)
 click to view
Estimated TM-score=0.52;
hard target.		 >SMODS and SLOG-associating 2TM effector domain 6 (Length=177)
MNKAELLRYIAETGYNVGFGAKKNFATYDLIEKMPGWIGFISTAVGILGLIIDALSTKLVSAIFVIIGICGLYISFYDKD
KNRYENAGKELTKLFNELKSLYFDVKCLSENSDVSAYQVRIQDIETRYFSLCISKQILFSNWYAHYKFFWEHQISWIDEQ
LKFRFIRDKIPLSLIFI
4322 PF17748
(VID27_N)
 click to view
Estimated TM-score=0.52;
very hard target.		 >VID27 N-terminal region (Length=176)
MFMLRNVSKYLFGDSSKESIVEVPQGQLYLVRPLSVKGYSELIFKDAAASIRRTGQDFQYQLVIQRAYEEGERELLGEDE
EEDGATEGLGAEKDERTFLLDEALRFRTDVRQTGEKVFAWKDLSGDEGDLWEFVCDSSVQPPTVATFEVVAVQCQYERKY
RRSHQQATEQDLQQFS
4323 PF17697
(DUF5543)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Family of unknown function (DUF5543) (Length=118)
MYCQDSNICAVFAVQGGKVGRKHGIKRGRRPSIRSPAQRARGPWIHESKHPAFAKQQINLEMPNSRATTELAWVCRSLTL
STAPLSPPPSLVHCEDCSCLPGCHSGDLYNLAPAERTC
4324 PF17646
(Zemlya)
 click to view
Estimated TM-score=0.52;
hard target.		 >Closterovirus 1a polyprotein central region (Length=105)
LPFEVAVSVIQKFIFDIPSVLTGKISPMQCVLRCATNLVFELNLNLAIAKIIGPSDTLKKDMFNRTVSSLISSAFLDRFT
FSPETFIRLSTVVPMVVRKLLVSFF
4325 PF17577
(ETM)
 click to view
Estimated TM-score=0.52;
hard target.		 >ECORI-T site (Length=109)
MDVLHGICVNINKFYKCRRIVIEYDNCSTSFTFDCAHDNRKVNCLEIVGLRRNEYVCMGKIINGDKIICVHENSVNGKII
VPVEDTFDFGLFTLKNKITDAVIKLNVYI
4326 PF17498
(DUF5433)
 click to view
Estimated TM-score=0.52;
hard target.		 >Family of unknown function (DUF5433) (Length=67)
MFASCFNVNGTNFILALCIIFVPTIKLYIQIIMRCVYANGINKRSTPFSHNSNPKFFKVYLNERSCV
4327 PF17467
(E7R)
 click to view
Estimated TM-score=0.52;
hard target.		 >Viral Protein E7 (Length=60)
MISMGDIITYNGCKDNKWMLEQLSTLNFNNLHVWNSCSIGNVTRIFYTFFSYLMKDKLDI
4328 PF17442
(U62_UL91)
 click to view
Estimated TM-score=0.52;
hard target.		 >Functional domain of U62 and UL91 proteins (Length=65)
MNSALNEIKDDFENCETKNDLFKIIDKISKNCNFIVEQVESLPRRVDSAAILFDNLAVEIFNDVI
4329 PF17412
(VraX)
 click to view
Estimated TM-score=0.52;
hard target.		 >Family of unknown function (Length=55)
MIIYRRNIENGTPVYEIITKTFKTITIKCDETFNKYEIYQLLSLLENDVDNMPTS
4330 PF17411
(SmaI)
 click to view
Estimated TM-score=0.52;
hard target.		 >Type II site-specific deoxyribonuclease (Length=239)
IVKAIPLLTEGQLYWLDRVIQVFNSSQQFKILHSDLFDQNTLENFGDALRIHHSFSMEPFSKDKFEYILEKVLKMSGHQA
SLAPKGNRGHDISINGCPISLKTQANKGIREDKIWISKFMELGKGKWGDDEKDLIGLRKMFLGHLKNYKRILILRALEKG
PQWHYELVEIPINLMKSAQKGELELKKKSKQFPKPGYCHVRTTKGENIYQLYFDAGSERKLQVKNLLKSYCKVHATWEF
4331 PF17388
(GP24_25)
 click to view
Estimated TM-score=0.52;
hard target.		 >Tail assembly gene products 24 & 25 (Length=130)
MTNVFTIDAFREEVKKKYAPVLIGLSDDVTVELKPLLKLGQKAREAVVEVFKEFADIPDLEEDDDDELVDEYSLQVCDII
AKAFRLIATKPKKLIAALDEEPDPRIRAELYAAVLNTWKRETQLGEAAPS
4332 PF17362
(pXO2-34)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Family of unknown function (Length=78)
RICSKKAIRSKALTIRLFDGSTWANLGNGQFINQETKKELPDYKIYPQIKTAVSSGGLIFAKRRNTKQNLQYVERPMK
4333 PF17336
(DUF5368)
 click to view
Estimated TM-score=0.52;
hard target.		 >Family of unknown function (DUF5368) (Length=111)
MKELTFETLIAVFEEIFGRGLFWVMVAVAVVVTLAYLYVLIRDRSVSWRKFLWAQLSMPVGAVLAVLFVLRMTRSGVSDM
GGPIDVIVLLGVAAAGAVGLAILVYTVESLI
4334 PF17325
(SPG4)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Stationary phase protein 4 (Length=112)
SFWDAFAVYDKKKHADPSVYGGNHNNTGDSKTQVMFSKEYRQPRTHQQENLQSMRRSSIGSQDSSDVEDVKEGRLPAEVE
IPKNVDISNMSQGEFLRLYESLRKGEPDNKVN
4335 PF17299
(DUF5350)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Family of unknown function (DUF5350) (Length=56)
MGKTGSIEWVKIKGRKGRVIKVPKSNAQKAHPGPAQRFTSSGHKRRFIRRSPKALV
4336 PF17246
(CDC24_OB1)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Cell division control protein 24, OB domain 1 (Length=133)
FLRFIDYARSMLSPEDENDDDEDFDLNGRIEADIKRPSWNWIASRILKTCTAYSSGVTAAILLSDLSQAWNEQHRDGAPR
KRPECINQLKKKRGRAKLPNTVTIDSIYEKNFLSMNSVLEAVIVDAFVLPGTN
4337 PF17079
(SOTI)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Male-specific protein scotti (Length=100)
ENPQVAMLLDAPHEPPIELHHMLEPVNVPQRPRKKRSFLTISKPFHVQPERCALISNGWRAVQCVQPEKRGEYFANYLIK
HMNSRNYPNGEGLPNRWGQF
4338 PF17027
(Bromo_TP_like)
 click to view
Estimated TM-score=0.52;
easy target.		 >Histone-fold protein (Length=119)
KILRLAVVEILSQSGFDKTADQALNVLTDILRYYIEHLGCRMRRKGENGIVPELICRFLVDEEYGECEYQIPELLSFLRY
QVTVKNYLNDRYSVGSEESILHILRVLPKNAQLRMVMRN
4339 PF16954
(HRG)
 click to view
Estimated TM-score=0.52;
easy target.		 >Haem-transporter, endosomal/lysosomal, haem-responsive gene (Length=52)
LKFFIAVGVLFSILAVTALITFLTLAITQKQSPTDPRSLYLSCVWSFLTLKW
4340 PF16931
(Phage_holin_8)
 click to view
Estimated TM-score=0.52;
hard target.		 >Putative phage holin (Length=121)
MSDPVSGTVAAGAALTGASIYGLLTGTDYGVIFGAFAGAVFYVATAADLTLIRRAAYFVVSYIAGVYGAGLVGSKLASWT
EYSDKPLDALGAVILSALTIKILTFASQQDPTQWFQRWRGG
4341 PF16663
(MAGI_u1)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Unstructured region on MAGI (Length=59)
TGDALQDSLPGSQQSTPRRTKSYNEMQNAGIVPTETEDDDEVPEMNSSFTGDSSEPDDH
4342 PF16637
(zf-C2H2_assoc3)
 click to view
Estimated TM-score=0.52;
hard target.		 >Putative zinc-finger between two C2H2 zinc-fingers on Patz (Length=72)
GPSNFCSICNRDGMSDGEKCPHQEQHDNSDSFGEFSDTSDLHSPTKQNENGPFSCDPVVNPKSDRDLEAERK
4343 PF16587
(DUF5061)
 click to view
Estimated TM-score=0.52;
hard target.		 >17 kDa common-antigen outer membrane protein (Length=104)
LLALVACLLLAACGGKQPEMAASPIDDPVVEKPLLDYLSTHDGGSSATLDDPEFGKSIRVFVEGSFLSASGQECRRATLL
TRDGQAEVVVACKGDDGTWTMAPR
4344 PF16501
(SCAPER_N)
 click to view
Estimated TM-score=0.52;
hard target.		 >S phase cyclin A-associated protein in the endoplasmic reticulum (Length=90)
GKKNDLRARYWSYLFDNLKRAVDEIYGTCEADESIVECQEVIMMLDQCRRDFSALIERINVQDAFEKADYKDRPTSLAWE
VRKSSPGKTL
4345 PF16494
(Na_Ca_ex_C)
 click to view
Estimated TM-score=0.52;
easy target.		 >C-terminal extension of sodium/calcium exchanger domain (Length=129)
RRLLFYKYMGKRYRADKRHGIVVETEGDLTPNKGGMEMIIDGKFPVRGGAVVPAENKELDESRKEVIRILKELKQKYPDK
ELDQLVELANYYALLHQQKSRAFYRIQATRMMIGAGNVLKKHAADHARR
4346 PF16429
(DUF5026)
 click to view
Estimated TM-score=0.52;
hard target.		 >Domain of unknown function (DUF5026) (Length=82)
LIVDSITKVFDTAQIKKGYLMYAKHRSWPDGRGGFVTAVTDKQITVQYHPGIANVTNHFFLPADEVAAGEWEVRWSADMI
EV
4347 PF16339
(DUF4969)
 click to view
Estimated TM-score=0.52;
hard target.		 >Domain of unknown function (DUF4969) (Length=79)
MKKRGLLLVSVLMLFIFLTVACGSSEDNEESGEISTKEIELTVDDPIIPTDENGEATIEGTVDPKSKLTIDGKAVKKDD
4348 PF16306
(DUF4948)
 click to view
Estimated TM-score=0.52;
hard target.		 >Domain of unknown function (DUF4948) (Length=171)
PPSDEEMIRHFTTHEVAFRKVYEIMAESSEGSFHYPPLSPEEVIILDSMEQSDTSHETNDEQDIPVYGLLKPERILLDSL
LSEIGCGFILVDRREWGTADSVYVSLVMPYYSHGIVDAGTSKSFVYDPGLRSRRNIRITEHGDLNEIYRRTYNDTTLYKP
IKGNWYIELDH
4349 PF16101
(PRIMA1)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Proline-rich membrane anchor 1 (Length=122)
LQKSCSKTIAEKGTDSCQEICQCRRPPPLPPPPPPPPPPRLLSLTPPNSTSCPAEEPWWSGLVIIIAVCCATLVFLVVIV
IICYKAIKRKPLRKEENGTSGTEYAMTSSQNNKTVDVNNAVV
4350 PF16085
(Phage_holin_3_5)
 click to view
Estimated TM-score=0.52;
hard target.		 >Bacteriophage holin Hol, superfamily III (Length=113)
MNSEQQALVEMPIWLVIFLSLVGGVSGEMWRADMAGVSGWFIFRQVLLRSGACVVCGLSTIMLLYSAGMSMWSASAIGCL
TATAGADVAIGLYKRWVAKRLGVCDVTSRSGEP
4351 PF16040
(DUF4792)
 click to view
Estimated TM-score=0.52;
hard target.		 >Domain of unknown function (DUF4792) (Length=70)
NATFNAFVVPGPPEMAEELVPVSMTRELELEDDMKEYWGFYLLKGSSVTVSACVSWPGASLIMIKGYKHL
4352 PF16020
(Deltameth_res)
 click to view
Estimated TM-score=0.52;
hard target.		 >Deltamethrin resistance (Length=48)
DDLPVPSGSWQARYDANQRRYNGILLFGIAFSVGSIIAVRYSSTLHCH
4353 PF16018
(Anillin_N)
 click to view
Estimated TM-score=0.52;
hard target.		 >Anillin N-terminus (Length=88)
VKTRMQKLAEQRRHWDNNSMTDDIPKSSLLPPMPAEEKAASPAKIPSAAASATPLGRRGRLANLAATICSWEDDVNYSSA
KQNSVQEQ
4354 PF15947
(DUF4755)
 click to view
Estimated TM-score=0.52;
hard target.		 >Domain of unknown function (DUF4755) (Length=128)
NYLNENNDGIYLHKFNDCEIRLDTNKQEVFLKNSEGANTYSFEEIKEWSYNITYGGEVAGTGLSSIRENGKTLSQNIADT
GLFIRVKDVRKPEWHIRFYPRNDSFNSRKGINDLKAQLNQWMEIFDQN
4355 PF15904
(LIP1)
 click to view
Estimated TM-score=0.52;
hard target.		 >LKB1 serine/threonine kinase interacting protein 1 (Length=90)
SGQCPLVHSLAKLLRNDGDLVLDGSSTLTLTASSLQQLTRMFEQYLLPRTKQHGFLALPSHPADTASLLQLQFLFDVLQK
TVSLKLINPP
4356 PF15848
(ODAPH)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Odontogenesis associated phosphoprotein (Length=108)
EEVVNPPGDSQNNANPTDCEIFTLTPPPATRNPVTRIQPITRTPRCPLHFFPPRWPRVYIRFPYRLYPPPKWNHHFQFHP
YFCPHSRLPPYYNYFPRRRLWRGSSSEE
4357 PF15810
(CCDC117)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Coiled-coil domain-containing protein 117 (Length=143)
EIEAAQRKLQEIEDRITLEDDEDEDLDVEPAPRRPVLVMSDSLKKGLQQGISDILPHTVAQSVSRSCMELVLWRPPEDPF
SQRLKDSLQKQRKQQTACRQTPTPCPSPSPHSPLNPSSPPADTHSPLYSFSVAHNSGEEEMEM
4358 PF15751
(FANCA_interact)
 click to view
Estimated TM-score=0.52;
very hard target.		 >FAAP20 FANCA interaction domain (Length=109)
ECARLWAELLRAAREDLNLDGEPPPLPAFPGQEPGRSPERTTPSEVFTVGPETFSWTPFPPALRRGRGRSYRVLRPAGGR
PRSPDRAPQGCPAPEPRGTPSAEEQPSVE
4359 PF15747
(DUF4687)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Domain of unknown function (DUF4687) (Length=120)
MVLNYVSMSAGDQGNRVAYRSSRGDLSPSALALVMVSGDSFLVTRPEAIHPGYTLRQAVRPGIRTENRRATGGAWGPTRF
IKGRDLDGRNRSRQSRFSPYPTPGVKLDLLRSVLQQRLIA
4360 PF15701
(DUF4668)
 click to view
Estimated TM-score=0.52;
hard target.		 >Domain of unknown function (DUF4668) (Length=162)
KKLSRVADIVYIVDTFLIPPLHPLKKQHPKVAKFLKVQLVFDLISLFIFATHQLLLLEDGSFGKHYFKRKTKRCSKFSCS
RCNANAHHPKWFKFKHSLLCLGTFCFGVYSLVKINKFFKTDQTVDLNRLLELFFWQLNAILNMKLFAFYGDHLESHSAPL
DV
4361 PF15613
(WSD)
 click to view
Estimated TM-score=0.52;
hard target.		 >Williams-Beuren syndrome DDT (WSD), D-TOX E motif (Length=99)
NIFPLGRDRIYRRYWIFPSIPGLFIEEDYSGLTEDMLLPRPSSFQNNVQSQDPQLPKPVHKPNRWCFYSSCEQLDQLIEA
LNSRGHRESALKETLLQEK
4362 PF15604
(Ntox15)
 click to view
Estimated TM-score=0.52;
hard target.		 >Novel toxin 15 (Length=146)
QHPAEFARQLSRQYEALSYLTVDEYLKGRNLYNTQKRAPTPPSLELQREDLEKKIVNRLVDDYRFDPDKAEKKAVEAVQA
LAALHEPDQSLQGTHQLAAGEIVWGNSSVNSSIGGQHKAGLARLDEKARDAQVAGKGHRYLNVRVV
4363 PF15543
(Ntox5)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Bacterial toxin 5 (Length=135)
MRRRLLAQRASGKESLLDFLLDADGQWQKGSFIARSGRPMRGRYALSDPDRQIVQAGHMLSDWYVKAMSRRDHLMLEDAD
LNWMSGFTEASGSVTSKSAVLIEGYPVDIPTARLWEAHGKLPAGTVSAAPVVEPP
4364 PF15475
(UPF0444)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Transmembrane protein C12orf23, UPF0444 (Length=91)
KDHPQQQPGMLSRVTGGLFSVTKGAVGATIGGVAWIGGKSLEITKTAVTSVPSMGVGLVKGSVSAVAGGVTAVGSAVASK
VPLTGKKKDKS
4365 PF15464
(DUF4633)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Domain of unknown function (DUF4633) (Length=115)
MGTGLRSQSLRGPRPSYGKLQEPWGRPQEGQLRRALSLRQGREKSRSQGLERGTEGPDATAQEWVPGSLGDTEQLIQAQR
GGSRRWLRRYQQQVRRRWESFVAIFPRVTLSQPAS
4366 PF15459
(RRP14)
 click to view
Estimated TM-score=0.52;
hard target.		 >60S ribosome biogenesis protein Rrp14 (Length=61)
IHQHSLFFDKLVELIPAKFYLPTDDKDKPWFQGLSKAQKASAKKESKENIKKARRDRLDPD
4367 PF15257
(DUF4590)
 click to view
Estimated TM-score=0.52;
hard target.		 >Domain of unknown function (DUF4590) (Length=107)
KDIDLRHEVKVFQQHCEGENICVYKGKLREGEFFQFISRRSRGFPFGLTFYLNGLQVEHLNSCCEFRHQKGSEPKGRDRH
FSFVSMDGASPCYKCVLAFGLYKKSIR
4368 PF15255
(CAP-ZIP_m)
 click to view
Estimated TM-score=0.52;
very hard target.		 >WASH complex subunit CAP-Z interacting, central region (Length=129)
PFKTKEPSPRIWKIQANLAINPAALLPTAAPQISGMKSVLPELGVPSSEPERIHSLESVPTLPGSGEAGVSFDLPAQADT
LHSANKTRVKVRGKRRPQTRAARQLAAQESSEAEDMSIPRGFVAQLADG
4369 PF15224
(SCRG1)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Scrapie-responsive protein 1 (Length=76)
PSRRPSCYKRALKDHDCHNIPEGMENLRQIDDGLQDHFWEGKGCEVICYCNLNELLCCPKDIFFGPKISFVIPCNS
4370 PF15221
(LEP503)
 click to view
Estimated TM-score=0.52;
hard target.		 >Lens epithelial cell protein LEP503 (Length=63)
MQPQRPLPQAMPSSPGRNLGDAALGTGTGKRLLGGNMAYGVIQSLKECLYFLLCCWCIKEILD
4371 PF15167
(DUF4581)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Domain of unknown function (DUF4581) (Length=130)
KELVDAAEKWCTGNPFDLIFAEDVDERRLDFYAEPGISFYVLCPDNLTGGTDNFHVWSESEDCLPFLQLAQDYISSCGKK
TLLEVLDKVFRSFRPLLGLPDIDDDTFDQYHADVEEEPEPDHQQMGVSQQ
4372 PF15143
(DUF4575)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Domain of unknown function (DUF4575) (Length=129)
RGRGEGLALSPLLPGVPPPPAMGVPRDRGGRGAGSQSTPRGGCLLPPRLGSQQPAGEEGLVLSPRLAGDASPCCDGSPKS
QGVKRGWLSVPTSRGVPPPPAIGVLIARGGRGAGSQSLPRGWSFTPLRW
4373 PF15108
(TMEM37)
 click to view
Estimated TM-score=0.52;
easy target.		 >Voltage-dependent calcium channel gamma-like subunit protein family (Length=183)
QAQRLLAQRRPRRPFFESFIRTLIIVCAALAVVLSSVSICDGHWLLAEDRLFGLWHFCTTSNQTRPHCLRDLSQAHVPGL
ALGMVLARSVSALAVVAAIFGLELLMVSQVCEDLYSRRKWALGSFLLLISFILSFGGLLSFVILLRNQVTLIGFTLMFWC
EFTASFLFFLNAISGLHINSITH
4374 PF15084
(DUF4550)
 click to view
Estimated TM-score=0.52;
hard target.		 >Domain of unknown function (DUF4550) (Length=94)
RFYHMEYFLLPDDIEPRKLDLVLFGPVAKLFLDTESKVVKPWLENDQIWVSWNHSIEINITNEFLIKLREHSIKLRLWDL
KEKVCSKARFCKLK
4375 PF15062
(ARL6IP6)
 click to view
Estimated TM-score=0.52;
hard target.		 >Haemopoietic lineage transmembrane helix (Length=86)
QQLTGYVQGQWSEALGWSERHQLVSKLSPLLCGLIVATFAYGMVYLDSAVPGVTPPSPFSPRSKQRFRQQKSASLHLGYL
CALFSG
4376 PF15045
(Clathrin_bdg)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Clathrin-binding box of Aftiphilin, vesicle trafficking (Length=79)
SRKLWRALQNTNSTSASRCLWSESRCQENLFLVLGIDAARKNLSGDPGHILECSDLKEPEELGVPTFRLQPCRALIQTK
4377 PF14936
(p53-inducible11)
 click to view
Estimated TM-score=0.52;
easy target.		 >Tumour protein p53-inducible protein 11 (Length=179)
MKKHSQTDLVSRLKTRKILGVGGEDDDGEVHRSKISQVLGNEIKFAVREPLGLRVWQLVSAVMFSGVAIMALAFPDQLYD
TVFDEESASSKTPIRLYGGALLSIALIMWNALYTAEKVIIRWTLLTEACYFTVQFLVTTVSLVESSRIATGAVLLLVSRA
LFILISIYYYYQVGRRPKK
4378 PF14855
(PapJ)
 click to view
Estimated TM-score=0.52;
hard target.		 >Pilus-assembly fibrillin subunit, chaperone (Length=187)
MNRATIGFYLAVVLGSCSMNGVSQADELLTRDDFFVADESRHQWVTEHNGRTGALNVKGALVSSPCILDTPEVNFPLQKD
KGRYVLNLKVSRCGDGHSDIPERQSTEHGNIVVKQSAVLKTGKDQILLSAWRNGGLSRKNLQHGDNQITYYINEAQYQKI
AKTQMPVTAHKTSDSNRGVMHLNIMYE
4379 PF14837
(INTS5_N)
 click to view
Estimated TM-score=0.52;
hard target.		 >Integrator complex subunit 5 N-terminus (Length=214)
QELAQEIKAFLSGVDPVHGTKLTLKEHARCAILLLRSLPPARHAVLEHLRAVFDEHVCTHLLERESGEAGLGAAAGRAPG
PSLDDVVQEVQHVLSDFVRANPKAWAPVVSAWSIDLMGQLSSKYAGRHGVPHASSLNELLQLWMSCKATRTLMDIYTQCL
SSMISTCPDACVDALLDTSVQHSPHFDWVVAHIGSSFPNTIISRVLSCGLKDFC
4380 PF14820
(SPRR2)
 click to view
Estimated TM-score=0.52;
hard target.		 >Small proline-rich 2 (Length=68)
SYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPPKCPQPCPPQQCQQKYPPVTPSPPCQQKYPP
4381 PF14774
(FAM177)
 click to view
Estimated TM-score=0.52;
very hard target.		 >FAM177 family (Length=117)
FETVEIAECKARKVKVPRRIIHFANGETMEEYSTDEEEEEEEEEHVKQVVPVDTSKLTWGPYFWFHMWRVATSTISVCDY
MGEKLASLFGITSPKYQYAIDEYYRMKKEEEEEEEEN
4382 PF14773
(VIGSSK)
 click to view
Estimated TM-score=0.52;
hard target.		 >Helicase-associated putative binding domain, C-terminal (Length=62)
SQLAALLTSENQEKMLESKKAKMPKSDAIQAILTSAGVEYTHDNSEVIGTSKVEEQLSRRAA
4383 PF14610
(DUF4448)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF4448) (Length=174)
TNKDGTGSFLVCNNADGANAPFCQPSRNSSLYPGTTYYVTWDTSVFNSTNTTVILEGSYINATTGEVASQAFSSDKITAG
WSYYAWAVDSKLLQGKSAANITLFLNALDADQNTTAKSYTGPTVLVTKPPTYHQPPPKMPTGAALYIGLPTVLGFCVIMI
FGVCLWNRQARKIS
4384 PF14491
(DUF4435)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF4435) (Length=230)
AVFCFVEGEDSKYYAAKIESIEPSYKYHFINSKGKEGVLKLFRLITGISEYDLIKTLYFVDRDFDELIDNPHIYETPCYS
IENLYTTKNTICRVLQREFQLDETDDDYYTALHAFSTHQSEFHDAMDQINAWIACHRDLSKQGITTRLNLSDLNPSNLVT
VSLTGVTQKYSFDSLIEMFPHAAEIDQETLENKLRSFRSIDRQKWYRGKFELFFFKKFIEILSEDSNRRH
4385 PF14463
(E1-N)
 click to view
Estimated TM-score=0.52;
very hard target.		 >E1 N-terminal domain (Length=150)
MNKATQQNAMMLASLLGVGEAEAGERLARTVLITAAPGWKSGWAVEVGELIGRTVQVSHQQEPTDPDLELVIGDVTPRTS
ARRVYADLGSEGAAASLEPVAKLAGEPHGLYAAAAACAVSAVVVHAVIDAADLPQARLPMRLDYAQLGVP
4386 PF14448
(Nuc_N)
 click to view
Estimated TM-score=0.52;
hard target.		 >Nuclease N terminal (Length=57)
ADSVSPIFKGVEILPDGSVVRSGTNYSGKFQEAHDASKASIQSRISNLESGGVKGTG
4387 PF14409
(Herpeto_peptide)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Ribosomally synthesized peptide in Herpetosiphon (Length=56)
MEFETTQINETPMIFGLTYLEEEAAEIDDVVGCFVVDGYSGTGCDDSDMPPGTQIP
4388 PF14388
(DUF4419)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Domain of unknown function (DUF4419) (Length=296)
NGFVNTIIRAYNTHQHLVLRPDDVWIAILGQFNFYVNAHAEQLRKQFVAHEGKKRLTVHAVGTRFTVDFGSMARQMSDLI
DQNVVDKELKDWILPDFSTTSQNDTVICSVMMMATLKAYFEYTFCLTCGIPSVTLEGTKADWEKLFKKVDKFESFGEEPK
AWARLLRPVLKGFVSAFEGKPDTAFWAKICHYEDFGSGSPFISGWITAFCVWSSEGKWLGPPLSGPYTDWRPAVQLDDVR
YMTVDETDIPPAFCEVDVLLNDNGEEFNCMMVAGHLATKVLDKERNKVAPLSAWFM
4389 PF14222
(MOR2-PAG1_N)
 click to view
Estimated TM-score=0.52;
hard target.		 >Cell morphogenesis N-terminal (Length=533)
ERRDLAVEFLFCLALIEVLKQLPFHPGHEDLITYIEQISFKHFKYREGIQSGPNAANIHIIADLYAEVVGVLAQSRFMSV
RKHFMNELKELRTKEASPTTTQSIISLLMGMKFFRVKMVPIEEFEASFQFMQECAQYFLEVKDKDVKHALAGLFVEILVP
VAAAVKNEVNVPCLKNFVDMLYSQTLDASTKSKHRLALFPLVTCLLCVSQKTFFLANWHYFLAMCLSNLKNRDQKMCRVA
LESLYRLLWVYMIRIKCESNQATQSRLQSIVNSLFPKGSKAVVPRDTPLNIFVKIIQFIAQERLDFAMKEIVFDLLSVGR
TIKIILTPERMSIGLRSFLVVADSLQQKEGEPPMPRTMGVLPSGNTLRVKKTFLNKMLTEDTARSIGMNSYFSHVRRVFV
DILRALDVQYGRPLMMTNTQNVNKEPDEMITGERKPRIDLFRTCVAAVPRLIPDGMTGAELVDLLARLTVHLDEELRVLA
YQSLQTLVLDFPDWRQDVICGFTQFLARDVLDTFPQLVDNGLRMLLQLLTSWK
4390 PF14221
(DUF4330)
 click to view
Estimated TM-score=0.52;
hard target.		 >Domain of unknown function (DUF4330) (Length=173)
MAILDSKGRLFGKVNILDLGALLVIVMVIFGIFVFPGTSGSVAQVGAKTVPIEVDLVVRGLNVRDPQQLAGNGLKKGGKT
KVIIRNQPYGEIEIKSVEQLPRTVVATQPDGSVKELPDPKANNFSTDMLLTLNGKAQVTKDGPVLGNSKVKIGMPFELEG
FNYNFNATVIDVR
4391 PF14177
(YkyB)
 click to view
Estimated TM-score=0.52;
hard target.		 >YkyB-like protein (Length=138)
TVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGDYYFHMPPTKEDF
EHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRRQPAYHKPVFKKLG
4392 PF14161
(FAM110_N)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Centrosome-associated N terminus (Length=105)
GVSSTAPFTSAMPFRILNKGPEYFRRQAETGARKPSAVERLEADKAKYVKSQQVASTKQEPVKPLVLKQPLFAPGVRKAM
LTPSRRTPPGARRVEACGSKPSLNL
4393 PF14006
(YqzL)
 click to view
Estimated TM-score=0.52;
hard target.		 >YqzL-like protein (Length=44)
DFTWKVFSQTGNIDTYLLFKELEKDTQEMPGNQEEELAEIDFPI
4394 PF13966
(zf-RVT)
 click to view
Estimated TM-score=0.52;
hard target.		 >zinc-binding in reverse transcriptase (Length=77)
FSSARTWNHLHPAGPTVPWYSQIWFKERILKLAFMAWLTVKDRLTTSDRLISWNILVPASCLLCLNGDESRDHLFFH
4395 PF13947
(GUB_WAK_bind)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Wall-associated receptor kinase galacturonan-binding (Length=99)
HCPSSCGDVDDIAYPFGIGPGCFREGFELKCNTSTKTPKLYMKDGTTQILYVGDDDLWAPMHFNITMKPGTDTYNISWVS
PRKGVTISQRNTFYIIGCN
4396 PF13901
(zf-RING_9)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Putative zinc-RING and/or ribbon (Length=188)
RRCEYTGRYYCSLCHWNSSSVVPARVLHNWDFEPRKVCRASLQFLRLMVKKPVLNIDKLNPMLFTFVEDLRHVKKLREDI
LRMKQYLTLCHAAQQQKLLLLLHKRQHFVEGSELYSLQDLIDLHDGNLLGYLTQVHQVFLDHITKTCEGCRGRGYLCKLC
DSDEVIFPLGGDTYTCTDCGSVYHRECR
4397 PF13865
(FoP_duplication)
 click to view
Estimated TM-score=0.52;
very hard target.		 >C-terminal duplication domain of Friend of PRMT1 (Length=78)
GLGRGAMGRGGISGRGRGIIGRGRGGFGGRGRGRGRGRGALSRPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTD
4398 PF13572
(DUF4134)
 click to view
Estimated TM-score=0.52;
hard target.		 >Domain of unknown function (DUF4134) (Length=91)
TALVVLATATASLAQGNGAAGIQEATTQVTSYFDPATTLIYAIGAVVGLVGAVKVFSKWNSGDQDTQKTAMSWFGSCIFL
VVVATVLRAFF
4399 PF13309
(HTH_22)
 click to view
Estimated TM-score=0.52;
easy target.		 >HTH domain (Length=62)
LEAMIEQVINRIGIPPARMQKEDKVRVVRELDLKGVFLIKGAVEKIASVLGVSRYTIYNYLD
4400 PF13162
(DUF3997)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF3997) (Length=105)
NDEYELIRTSGNAFEIFPSQDAVYATQYIPAKITDIAWDDKYIIAKQTEEKSDPNNPDAAIANKKSEHYWIIDVKHNKRF
GPYNEKQFNEQKDAFKIKVPFQNVD

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